Package: Nestimate
Title: Dynamic, Probabilistic, and Higher-Order Network Analysis
Version: 0.9.26
Authors@R: c(
    person("Mohammed", "Saqr", email = "saqr@saqr.me", role = c("aut", "cre", "cph")),
    person("Sonsoles", "López-Pernas", email = "sonsoles.lopez@uef.fi", role = "aut"),
    person("Kamila", "Misiejuk", email = "kamila.misiejuk@fernuni-hagen.de", role = "aut")
    )
Description: Estimate, compare, and analyze dynamic and psychological
        networks using a unified interface. Provides transition network
        analysis estimation (transition, frequency, co-occurrence,
        attention-weighted) Saqr et al. (2025)
        <doi:10.1145/3706468.3706513>, psychological network methods
        (correlation, partial correlation, 'graphical lasso', 'Ising')
        Saqr, Beck, and Lopez-Pernas (2024)
        <doi:10.1007/978-3-031-54464-4_19>, and higher-order network
        methods including higher-order networks, higher-order network
        embedding, hyper-path anomaly, and multi-order generative
        model. Supports bootstrap inference, permutation testing,
        split-half reliability, centrality stability analysis, mixed
        Markov models, multi-cluster multi-layer networks and
        clustering.
License: MIT + file LICENSE
URL: https://github.com/mohsaqr/Nestimate,
        https://pak.dynasite.org/Nestimate/
BugReports: https://github.com/mohsaqr/Nestimate/issues
Language: en-US
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Imports: ggplot2, data.table, cluster, scales, brglm2, nnet,
        idiographic (>= 0.3.4), psychnets (>= 0.5.2)
Suggests: testthat (>= 3.0.0), igraph, glmnet, lavaan, stringdist,
        gridExtra, lme4, corpcor, Matrix, cograph (>= 2.4.4),
        ggfittext, knitr, rmarkdown, tna
Config/testthat/edition: 3
Depends: R (>= 4.1.0)
LazyData: true
VignetteBuilder: knitr
Repository: https://mohsaqr.r-universe.dev
Date/Publication: 2026-10-12 13:18:07 UTC
RemoteUrl: https://github.com/mohsaqr/Nestimate
RemoteRef: HEAD
RemoteSha: 57941e9406aa307d8880503386db0e51f4b91fd6
NeedsCompilation: no
Packaged: 2026-10-12 16:01:03 UTC; root
Author: Mohammed Saqr [aut, cre, cph],
  Sonsoles López-Pernas [aut],
  Kamila Misiejuk [aut]
Maintainer: Mohammed Saqr <saqr@saqr.me>